Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Gm28324-201ENSMUST00000187913 264 ntBASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Gm38210-201ENSMUST00000191944 809 ntBASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Herc2Q4U2R1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Herc2Q4U2R1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.34□□□□□ -1.08
Herc2Q4U2R1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Herc2Q4U2R1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm15957-201ENSMUST00000118893 974 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm7902-201ENSMUST00000198842 947 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm6722-201ENSMUST00000221586 390 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Mxra8os-201ENSMUST00000097740 687 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm13123-201ENSMUST00000122173 492 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Mir6923-201ENSMUST00000184592 72 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm7207-201ENSMUST00000211575 1067 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm43352-201ENSMUST00000196419 3065 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm13665-201ENSMUST00000120830 528 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gm43778-201ENSMUST00000199438 199 ntBASIC8.33□□□□□ -1.08
Herc2Q4U2R1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Herc2Q4U2R1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Gm7809-201ENSMUST00000153199 742 ntBASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Gm18730-201ENSMUST00000218038 343 ntBASIC8.32□□□□□ -1.08
Herc2Q4U2R1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Herc2Q4U2R1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms