Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Gm8584-201ENSMUST00000171982 758 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Gm17968-201ENSMUST00000194902 784 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cul4aQ3TCH7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cul4aQ3TCH7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Gm15483-201ENSMUST00000120338 456 ntBASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cul4aQ3TCH7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Gm2651-201ENSMUST00000203560 838 ntBASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.11■□□□□ 0.01
Cul4aQ3TCH7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms