Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.13□□□□□ -0.47
Npas1P97459 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Npas1P97459 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Npas1P97459 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Npas1P97459 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.13□□□□□ -0.47
Npas1P97459 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Npas1P97459 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.13□□□□□ -0.47
Npas1P97459 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.13□□□□□ -0.47
Npas1P97459 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Npas1P97459 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.13□□□□□ -0.47
Npas1P97459 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.13□□□□□ -0.47
Npas1P97459 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.12□□□□□ -0.47
Npas1P97459 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.12□□□□□ -0.47
Npas1P97459 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Npas1P97459 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.12□□□□□ -0.47
Npas1P97459 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Npas1P97459 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.12□□□□□ -0.47
Npas1P97459 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Npas1P97459 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.11□□□□□ -0.47
Npas1P97459 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.11□□□□□ -0.47
Npas1P97459 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Npas1P97459 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.11□□□□□ -0.47
Npas1P97459 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.11□□□□□ -0.47
Npas1P97459 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.11□□□□□ -0.47
Npas1P97459 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Npas1P97459 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Npas1P97459 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Npas1P97459 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.1□□□□□ -0.47
Npas1P97459 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Npas1P97459 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.1□□□□□ -0.47
Npas1P97459 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms