Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.29□□□□□ -0.28
Cacna1aP97445 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cacna1aP97445 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.29□□□□□ -0.28
Cacna1aP97445 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.29□□□□□ -0.28
Cacna1aP97445 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cacna1aP97445 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Mir5132-201ENSMUST00000175166 71 ntBASIC13.29□□□□□ -0.28
Cacna1aP97445 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.29□□□□□ -0.28
Cacna1aP97445 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Olfr286-202ENSMUST00000205305 969 ntBASIC13.29□□□□□ -0.28
Cacna1aP97445 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.29□□□□□ -0.28
Cacna1aP97445 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cacna1aP97445 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.28□□□□□ -0.28
Cacna1aP97445 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cacna1aP97445 Gm5356-201ENSMUST00000093326 615 ntBASIC13.28□□□□□ -0.28
Cacna1aP97445 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.28□□□□□ -0.28
Cacna1aP97445 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cacna1aP97445 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1aP97445 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cacna1aP97445 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1aP97445 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1aP97445 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.27□□□□□ -0.28
Cacna1aP97445 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1aP97445 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1aP97445 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.27□□□□□ -0.29
Cacna1aP97445 Gm5279-201ENSMUST00000199575 745 ntBASIC13.27□□□□□ -0.29
Cacna1aP97445 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.27□□□□□ -0.29
Cacna1aP97445 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cacna1aP97445 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cacna1aP97445 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cacna1aP97445 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1aP97445 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms