Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Hmgb1P63158 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Hmgb1P63158 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Mzt1-203ENSMUST00000227948 952 ntBASIC15.88■□□□□ 0.13
Hmgb1P63158 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hmgb1P63158 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hmgb1P63158 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Gm5479-201ENSMUST00000160578 435 ntBASIC15.87■□□□□ 0.13
Hmgb1P63158 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Gm45747-201ENSMUST00000212203 999 ntBASIC15.87■□□□□ 0.13
Hmgb1P63158 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.87■□□□□ 0.13
Hmgb1P63158 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.87■□□□□ 0.13
Hmgb1P63158 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hmgb1P63158 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.87■□□□□ 0.13
Hmgb1P63158 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Hmgb1P63158 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Gm9385-201ENSMUST00000117563 472 ntBASIC15.86■□□□□ 0.13
Hmgb1P63158 Gm37230-201ENSMUST00000194491 818 ntBASIC15.86■□□□□ 0.13
Hmgb1P63158 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.86■□□□□ 0.13
Hmgb1P63158 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Hmgb1P63158 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgb1P63158 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hmgb1P63158 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hmgb1P63158 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hmgb1P63158 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hmgb1P63158 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms