Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.53■□□□□ 0.08
Nub1P54729 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.53■□□□□ 0.08
Nub1P54729 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nub1P54729 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nub1P54729 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Nub1P54729 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nub1P54729 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nub1P54729 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Nub1P54729 Gm23547-201ENSMUST00000158210 271 ntBASIC15.52■□□□□ 0.08
Nub1P54729 Gm38225-201ENSMUST00000194001 393 ntBASIC15.52■□□□□ 0.08
Nub1P54729 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Gm9182-201ENSMUST00000217829 639 ntBASIC15.52■□□□□ 0.08
Nub1P54729 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.52■□□□□ 0.08
Nub1P54729 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nub1P54729 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Nub1P54729 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.52■□□□□ 0.07
Nub1P54729 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.52■□□□□ 0.07
Nub1P54729 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.52■□□□□ 0.07
Nub1P54729 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.52■□□□□ 0.07
Nub1P54729 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nub1P54729 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.51■□□□□ 0.07
Nub1P54729 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Nub1P54729 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nub1P54729 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.51■□□□□ 0.07
Nub1P54729 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Nub1P54729 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.51■□□□□ 0.07
Nub1P54729 Gm26308-201ENSMUST00000157768 69 ntBASIC15.51■□□□□ 0.07
Nub1P54729 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.51■□□□□ 0.07
Nub1P54729 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.51■□□□□ 0.07
Nub1P54729 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.51■□□□□ 0.07
Nub1P54729 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Nub1P54729 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nub1P54729 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nub1P54729 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nub1P54729 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Nub1P54729 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nub1P54729 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nub1P54729 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nub1P54729 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.5■□□□□ 0.07
Nub1P54729 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.5■□□□□ 0.07
Nub1P54729 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Nub1P54729 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.5■□□□□ 0.07
Nub1P54729 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.5■□□□□ 0.07
Nub1P54729 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nub1P54729 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.5■□□□□ 0.07
Nub1P54729 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.5■□□□□ 0.07
Nub1P54729 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nub1P54729 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms