Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Vps4bP46467 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.65□□□□□ -0.06
Vps4bP46467 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps4bP46467 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.65□□□□□ -0.06
Vps4bP46467 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps4bP46467 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
Vps4bP46467 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Vps4bP46467 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Gm14822-201ENSMUST00000122247 291 ntBASIC14.64□□□□□ -0.07
Vps4bP46467 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Gm5177-201ENSMUST00000183092 997 ntBASIC14.64□□□□□ -0.07
Vps4bP46467 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.64□□□□□ -0.07
Vps4bP46467 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps4bP46467 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps4bP46467 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Vps4bP46467 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.63□□□□□ -0.07
Vps4bP46467 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Vps4bP46467 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Vps4bP46467 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.63□□□□□ -0.07
Vps4bP46467 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.63□□□□□ -0.07
Vps4bP46467 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.63□□□□□ -0.07
Vps4bP46467 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Vps4bP46467 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps4bP46467 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.63□□□□□ -0.07
Vps4bP46467 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps4bP46467 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms