Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sdc2P43407 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.19■□□□□ 0.18
Sdc2P43407 Gm18733-201ENSMUST00000173950 856 ntBASIC16.19■□□□□ 0.18
Sdc2P43407 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sdc2P43407 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.19■□□□□ 0.18
Sdc2P43407 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.19■□□□□ 0.18
Sdc2P43407 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Sdc2P43407 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Sdc2P43407 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sdc2P43407 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.18■□□□□ 0.18
Sdc2P43407 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sdc2P43407 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sdc2P43407 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sdc2P43407 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.18■□□□□ 0.18
Sdc2P43407 Gm9385-201ENSMUST00000117563 472 ntBASIC16.18■□□□□ 0.18
Sdc2P43407 Gm14140-201ENSMUST00000119999 995 ntBASIC16.18■□□□□ 0.18
Sdc2P43407 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Gm9182-201ENSMUST00000217829 639 ntBASIC16.18■□□□□ 0.18
Sdc2P43407 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sdc2P43407 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sdc2P43407 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sdc2P43407 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.17■□□□□ 0.18
Sdc2P43407 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.17■□□□□ 0.18
Sdc2P43407 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.17■□□□□ 0.18
Sdc2P43407 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.17■□□□□ 0.18
Sdc2P43407 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdc2P43407 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdc2P43407 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.17■□□□□ 0.18
Sdc2P43407 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.17■□□□□ 0.18
Sdc2P43407 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sdc2P43407 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.17■□□□□ 0.18
Sdc2P43407 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Sdc2P43407 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdc2P43407 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sdc2P43407 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sdc2P43407 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sdc2P43407 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.16■□□□□ 0.18
Sdc2P43407 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdc2P43407 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Sdc2P43407 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms