Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm27514-201ENSMUST00000183692 110 ntBASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm45880-201ENSMUST00000213041 853 ntBASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.74□□□□□ -0.05
Cxcl12P40224 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Cxcl12P40224 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.74□□□□□ -0.05
Cxcl12P40224 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Gm18054-201ENSMUST00000207539 555 ntBASIC14.74□□□□□ -0.05
Cxcl12P40224 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cxcl12P40224 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl12P40224 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Gm16570-201ENSMUST00000161951 436 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 Gm24196-201ENSMUST00000179161 110 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 Gm38241-201ENSMUST00000192641 898 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 Gm43822-201ENSMUST00000200285 476 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 Gm3961-201ENSMUST00000204425 994 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.73□□□□□ -0.05
Cxcl12P40224 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl12P40224 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl12P40224 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm15371-201ENSMUST00000117057 784 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms