Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sox5P35710 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sox5P35710 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox5P35710 Mir8098-201ENSMUST00000184011 137 ntBASIC15.77■□□□□ 0.12
Sox5P35710 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox5P35710 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox5P35710 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox5P35710 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox5P35710 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox5P35710 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Sox5P35710 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Sox5P35710 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox5P35710 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox5P35710 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox5P35710 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Gm5864-201ENSMUST00000202263 970 ntBASIC15.76■□□□□ 0.11
Sox5P35710 Gm9182-201ENSMUST00000217829 639 ntBASIC15.76■□□□□ 0.11
Sox5P35710 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox5P35710 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.76■□□□□ 0.11
Sox5P35710 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox5P35710 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sox5P35710 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox5P35710 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.75■□□□□ 0.11
Sox5P35710 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Sox5P35710 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox5P35710 Gm13884-201ENSMUST00000118103 829 ntBASIC15.75■□□□□ 0.11
Sox5P35710 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.75■□□□□ 0.11
Sox5P35710 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.75■□□□□ 0.11
Sox5P35710 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.75■□□□□ 0.11
Sox5P35710 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.75■□□□□ 0.11
Sox5P35710 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox5P35710 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox5P35710 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.75■□□□□ 0.11
Sox5P35710 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox5P35710 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Sox5P35710 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.74■□□□□ 0.11
Sox5P35710 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sox5P35710 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Mir5126-201ENSMUST00000175513 77 ntBASIC15.74■□□□□ 0.11
Sox5P35710 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox5P35710 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.74■□□□□ 0.11
Sox5P35710 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms