Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gja4P28235 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gja4P28235 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gja4P28235 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gja4P28235 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.38□□□□□ -0.11
Gja4P28235 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gja4P28235 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Gm15957-201ENSMUST00000118893 974 ntBASIC14.38□□□□□ -0.11
Gja4P28235 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.38□□□□□ -0.11
Gja4P28235 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gja4P28235 Gm5354-201ENSMUST00000182417 973 ntBASIC14.38□□□□□ -0.11
Gja4P28235 Gm21470-201ENSMUST00000187680 696 ntBASIC14.38□□□□□ -0.11
Gja4P28235 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.38□□□□□ -0.11
Gja4P28235 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Gja4P28235 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Gja4P28235 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gja4P28235 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gja4P28235 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Gja4P28235 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gja4P28235 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.37□□□□□ -0.11
Gja4P28235 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.37□□□□□ -0.11
Gja4P28235 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gja4P28235 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.37□□□□□ -0.11
Gja4P28235 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.37□□□□□ -0.11
Gja4P28235 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gja4P28235 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gja4P28235 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gja4P28235 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.36□□□□□ -0.11
Gja4P28235 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.36□□□□□ -0.11
Gja4P28235 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.36□□□□□ -0.11
Gja4P28235 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gja4P28235 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Gja4P28235 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms