Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCL3L1P16619 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCL3L1P16619 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CCL3L1P16619 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL3L1P16619 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCL3L1P16619 AL020989.1-201ENST00000422979 469 ntBASIC14.36□□□□□ -0.11
CCL3L1P16619 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL3L1P16619 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL3L1P16619 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.36□□□□□ -0.11
CCL3L1P16619 RN7SL510P-201ENST00000581311 263 ntBASIC14.36□□□□□ -0.11
CCL3L1P16619 AL355877.3-201ENST00000622820 899 ntBASIC14.36□□□□□ -0.11
CCL3L1P16619 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCL3L1P16619 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CCL3L1P16619 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 AC079776.2-201ENST00000641154 1609 ntBASIC14.36□□□□□ -0.11
CCL3L1P16619 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL3L1P16619 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL3L1P16619 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCL3L1P16619 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL3L1P16619 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 FGFR3P6-201ENST00000457012 610 ntBASIC14.35□□□□□ -0.11
CCL3L1P16619 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.35□□□□□ -0.11
CCL3L1P16619 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL3L1P16619 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL3L1P16619 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 AL691432.3-201ENST00000621860 400 ntBASIC14.35□□□□□ -0.11
CCL3L1P16619 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL3L1P16619 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL3L1P16619 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCL3L1P16619 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.34□□□□□ -0.11
CCL3L1P16619 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL3L1P16619 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL3L1P16619 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL3L1P16619 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL3L1P16619 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL3L1P16619 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL3L1P16619 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL3L1P16619 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms