Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smim1P0C8K7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Gm7901-201ENSMUST00000120430 1597 ntBASIC9.91□□□□□ -0.82
Smim1P0C8K7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.91□□□□□ -0.82
Smim1P0C8K7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smim1P0C8K7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.9□□□□□ -0.82
Smim1P0C8K7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gm16061-201ENSMUST00000122167 857 ntBASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Gm18101-201ENSMUST00000215769 548 ntBASIC9.9□□□□□ -0.82
Smim1P0C8K7 AC117588.1-201ENSMUST00000228510 999 ntBASIC9.9□□□□□ -0.82
Smim1P0C8K7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smim1P0C8K7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smim1P0C8K7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.89□□□□□ -0.83
Smim1P0C8K7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.89□□□□□ -0.83
Smim1P0C8K7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC9.89□□□□□ -0.83
Smim1P0C8K7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.89□□□□□ -0.83
Smim1P0C8K7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smim1P0C8K7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms