Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Grk6-205ENSMUST00000224653 2976 ntBASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa8J3QNX5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa8J3QNX5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Gm33142-201ENSMUST00000193913 867 ntBASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa8J3QNX5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa8J3QNX5 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.15□□□□□ -0.3
Shisa8J3QNX5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms