Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Gm11918-201ENSMUST00000121660 179 ntBASIC17.26■□□□□ 0.35
Ube4aE9Q735 Gm43433-201ENSMUST00000196573 481 ntBASIC17.26■□□□□ 0.35
Ube4aE9Q735 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.26■□□□□ 0.35
Ube4aE9Q735 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.26■□□□□ 0.35
Ube4aE9Q735 Sybu-209ENSMUST00000228639 4113 ntBASIC17.26■□□□□ 0.35
Ube4aE9Q735 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4aE9Q735 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Gm12341-201ENSMUST00000119724 503 ntBASIC17.25■□□□□ 0.35
Ube4aE9Q735 Gm17795-201ENSMUST00000214505 757 ntBASIC17.25■□□□□ 0.35
Ube4aE9Q735 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.25■□□□□ 0.35
Ube4aE9Q735 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ube4aE9Q735 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.24■□□□□ 0.35
Ube4aE9Q735 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Gm14127-201ENSMUST00000117906 678 ntBASIC17.24■□□□□ 0.35
Ube4aE9Q735 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Gm37714-201ENSMUST00000194742 342 ntBASIC17.24■□□□□ 0.35
Ube4aE9Q735 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4aE9Q735 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ube4aE9Q735 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube4aE9Q735 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms