Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nkx6-2D3Z4R4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-2D3Z4R4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm13474-201ENSMUST00000122466 815 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm37856-201ENSMUST00000191634 999 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-2D3Z4R4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-2D3Z4R4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-2D3Z4R4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms