Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm21577-201ENSMUST00000190823 697 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm20802-201ENSMUST00000190832 698 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 AC154184.3-201ENSMUST00000225620 1090 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm45684-201ENSMUST00000210244 1571 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm19459-201ENSMUST00000176240 835 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Mir6973a-201ENSMUST00000183646 78 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm13097-201ENSMUST00000210722 397 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ubr4A2AN08 AC163637.1-201ENSMUST00000215491 1894 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm12286-201ENSMUST00000119246 1002 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm15276-201ENSMUST00000145953 498 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Gm19287-201ENSMUST00000203190 358 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 AC137950.2-202ENSMUST00000227150 1635 ntBASIC7.43□□□□□ -1.22
Ubr4A2AN08 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ubr4A2AN08 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm37269-201ENSMUST00000193906 1891 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm4691-201ENSMUST00000182339 1000 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm37922-201ENSMUST00000195596 455 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm2451-201ENSMUST00000199447 999 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm10290-201ENSMUST00000200451 999 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm11952-201ENSMUST00000121172 821 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 AC154806.6-201ENSMUST00000228192 202 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm11980-201ENSMUST00000121445 986 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ubr4A2AN08 Gm4760-201ENSMUST00000119663 1030 ntBASIC7.42□□□□□ -1.22
Ubr4A2AN08 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms