Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Gm18473-201ENSMUST00000220543 868 ntBASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1fQ9JIS7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Mir1982-201ENSMUST00000157368 74 ntBASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Gm24420-201ENSMUST00000176676 59 ntBASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Gm10478-201ENSMUST00000084451 396 ntBASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1fQ9JIS7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Gm12928-201ENSMUST00000117115 573 ntBASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Gm43118-201ENSMUST00000199149 775 ntBASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1fQ9JIS7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Gm8652-201ENSMUST00000181363 964 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Gm45784-201ENSMUST00000188360 142 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.15■□□□□ 0.18
Cacna1fQ9JIS7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cacna1fQ9JIS7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms