Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Chchd1Q9CQA6 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chchd1Q9CQA6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chchd1Q9CQA6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms