Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.52■□□□□ 0.08
Tlr3Q99MB1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tlr3Q99MB1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tlr3Q99MB1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tlr3Q99MB1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tlr3Q99MB1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tlr3Q99MB1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tlr3Q99MB1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Gm2810-201ENSMUST00000118681 990 ntBASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.51■□□□□ 0.07
Tlr3Q99MB1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Gm27321-201ENSMUST00000185021 205 ntBASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Gm5186-201ENSMUST00000218781 920 ntBASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tlr3Q99MB1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tlr3Q99MB1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms