Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Thap2-203ENSMUST00000218989 527 ntBASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm11779-201ENSMUST00000118541 368 ntBASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1b1Q99LU0 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Gm17271-201ENSMUST00000165535 355 ntBASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp1b1Q99LU0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms