Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 BC001981-202ENSMUST00000191393 1545 ntBASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm17150-201ENSMUST00000165577 381 ntBASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm9002-201ENSMUST00000178437 499 ntBASIC16.61■□□□□ 0.25
Rfc4Q99J62 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Rfc4Q99J62 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfc4Q99J62 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfc4Q99J62 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.6■□□□□ 0.25
Rfc4Q99J62 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.59■□□□□ 0.25
Rfc4Q99J62 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.59■□□□□ 0.25
Rfc4Q99J62 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.59■□□□□ 0.25
Rfc4Q99J62 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfc4Q99J62 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Sybu-209ENSMUST00000228639 4113 ntBASIC16.58■□□□□ 0.25
Rfc4Q99J62 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfc4Q99J62 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms