Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb3Q91XZ7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm25990-201ENSMUST00000102440 86 ntBASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm18206-201ENSMUST00000207027 926 ntBASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb3Q91XZ7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms