Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx54Q8K4L0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm6983-201ENSMUST00000214912 628 ntBASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Mettl6-204ENSMUST00000227595 1027 ntBASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ddx54Q8K4L0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Gm38002-201ENSMUST00000193255 180 ntBASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Gm44364-201ENSMUST00000198368 141 ntBASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.73■□□□□ 0.59
Ddx54Q8K4L0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Gm15957-201ENSMUST00000118893 974 ntBASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Gm13342-201ENSMUST00000121055 207 ntBASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.72■□□□□ 0.59
Ddx54Q8K4L0 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms