Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Gm10231-201ENSMUST00000181584 441 ntBASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Gm10175-202ENSMUST00000208752 441 ntBASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf4Q8K4J2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Gm12497-201ENSMUST00000138778 237 ntBASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Rprl3-201ENSMUST00000157400 290 ntBASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf4Q8K4J2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gm10013-201ENSMUST00000106074 672 ntBASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Gm45328-201ENSMUST00000210942 917 ntBASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ebf4Q8K4J2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms