Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gm15321-201ENSMUST00000121290 288 ntBASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gm16215-201ENSMUST00000161990 637 ntBASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rftn2Q8CHX7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm12585-201ENSMUST00000117307 290 ntBASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm29667-201ENSMUST00000190817 490 ntBASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rftn2Q8CHX7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Gm15460-201ENSMUST00000118147 391 ntBASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Gm15393-201ENSMUST00000120499 219 ntBASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Gm20445-201ENSMUST00000061905 565 ntBASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rftn2Q8CHX7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms