Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Alx1Q8C8B0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Alx1Q8C8B0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Gm6916-202ENSMUST00000205523 195 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Gm46209-201ENSMUST00000217912 553 ntBASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Alx1Q8C8B0 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Alx1Q8C8B0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gm9229-201ENSMUST00000222777 126 ntBASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Alx1Q8C8B0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Gm27989-201ENSMUST00000184721 107 ntBASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms