Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Matn2-206ENSMUST00000228570 2798 ntBASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Aph1bQ8C7N7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Aph1bQ8C7N7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gm10275-202ENSMUST00000168697 495 ntBASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Rpph1-201ENSMUST00000175096 319 ntBASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Gm10275-201ENSMUST00000092620 635 ntBASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Aph1bQ8C7N7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Aph1bQ8C7N7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.27□□□□□ -0.13
Aph1bQ8C7N7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Aph1bQ8C7N7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Aph1bQ8C7N7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Aph1bQ8C7N7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Aph1bQ8C7N7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms