Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scfd1Q8BRF7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Gm11424-201ENSMUST00000121929 829 ntBASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scfd1Q8BRF7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scfd1Q8BRF7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Scfd1Q8BRF7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scfd1Q8BRF7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scfd1Q8BRF7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gm9797-201ENSMUST00000052902 613 ntBASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scfd1Q8BRF7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scfd1Q8BRF7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms