Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rd3Q8BRE0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 BC037039-201ENSMUST00000192003 2205 ntBASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rd3Q8BRE0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Gm14042-201ENSMUST00000120139 833 ntBASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Gm12091-201ENSMUST00000146791 830 ntBASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rd3Q8BRE0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rd3Q8BRE0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms