Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 Gm9823-201ENSMUST00000051212 327 ntBASIC18.64■□□□□ 0.57
Col16a1Q8BLX7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col16a1Q8BLX7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm12384-201ENSMUST00000119228 919 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Proscos-202ENSMUST00000178990 666 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm38241-201ENSMUST00000192641 898 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm44397-201ENSMUST00000195950 113 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm43118-201ENSMUST00000199149 775 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Gm18473-201ENSMUST00000220543 868 ntBASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col16a1Q8BLX7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gm6013-201ENSMUST00000212264 699 ntBASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col16a1Q8BLX7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col16a1Q8BLX7 Gm22018-201ENSMUST00000104357 131 ntBASIC18.6■□□□□ 0.57
Col16a1Q8BLX7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col16a1Q8BLX7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col16a1Q8BLX7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms