Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp2bQ8BJF9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp2bQ8BJF9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp2bQ8BJF9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Chmp2bQ8BJF9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms