Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SynbQ8BI41 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SynbQ8BI41 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SynbQ8BI41 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.85□□□□□ -0.19
SynbQ8BI41 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm27618-201ENSMUST00000183671 60 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Mir8102-201ENSMUST00000184148 139 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm38225-201ENSMUST00000194001 393 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SynbQ8BI41 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.85□□□□□ -0.19
SynbQ8BI41 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SynbQ8BI41 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.84□□□□□ -0.19
SynbQ8BI41 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.84□□□□□ -0.19
SynbQ8BI41 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SynbQ8BI41 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SynbQ8BI41 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.83□□□□□ -0.19
SynbQ8BI41 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.83□□□□□ -0.19
SynbQ8BI41 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.83□□□□□ -0.2
SynbQ8BI41 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Gm13453-201ENSMUST00000118708 357 ntBASIC13.83□□□□□ -0.2
SynbQ8BI41 Gm12151-201ENSMUST00000121374 290 ntBASIC13.83□□□□□ -0.2
SynbQ8BI41 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Mir7684-201ENSMUST00000183858 60 ntBASIC13.83□□□□□ -0.2
SynbQ8BI41 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SynbQ8BI41 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SynbQ8BI41 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.82□□□□□ -0.2
SynbQ8BI41 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SynbQ8BI41 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms