Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh19Q80TF3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh19Q80TF3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh19Q80TF3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh19Q80TF3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh19Q80TF3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh19Q80TF3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms