Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snrnp40Q6PE01 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snrnp40Q6PE01 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snrnp40Q6PE01 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snrnp40Q6PE01 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.65□□□□□ -0.39
Snrnp40Q6PE01 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Snrnp40Q6PE01 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Snrnp40Q6PE01 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms