Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sox17Q61473 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Sox17Q61473 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox17Q61473 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox17Q61473 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox17Q61473 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm18489-201ENSMUST00000172565 551 ntBASIC13.56□□□□□ -0.24
Sox17Q61473 Gm9726-201ENSMUST00000180321 678 ntBASIC13.56□□□□□ -0.24
Sox17Q61473 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.56□□□□□ -0.24
Sox17Q61473 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox17Q61473 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox17Q61473 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.55□□□□□ -0.24
Sox17Q61473 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox17Q61473 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox17Q61473 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox17Q61473 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox17Q61473 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sox17Q61473 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.55□□□□□ -0.24
Sox17Q61473 Gm9682-201ENSMUST00000197505 556 ntBASIC13.55□□□□□ -0.24
Sox17Q61473 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox17Q61473 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox17Q61473 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Sox17Q61473 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox17Q61473 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.55□□□□□ -0.24
Sox17Q61473 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox17Q61473 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox17Q61473 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox17Q61473 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms