Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.33■□□□□ 0.36
Mre11Q61216 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.33■□□□□ 0.36
Mre11Q61216 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mre11Q61216 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mre11Q61216 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.33■□□□□ 0.36
Mre11Q61216 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mre11Q61216 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.32■□□□□ 0.36
Mre11Q61216 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.32■□□□□ 0.36
Mre11Q61216 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Gm44454-201ENSMUST00000198541 138 ntBASIC17.32■□□□□ 0.36
Mre11Q61216 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mre11Q61216 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mre11Q61216 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mre11Q61216 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mre11Q61216 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mre11Q61216 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Mre11Q61216 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC17.31■□□□□ 0.36
Mre11Q61216 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.31■□□□□ 0.36
Mre11Q61216 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.31■□□□□ 0.36
Mre11Q61216 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Mre11Q61216 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.31■□□□□ 0.36
Mre11Q61216 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.31■□□□□ 0.36
Mre11Q61216 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mre11Q61216 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.3■□□□□ 0.36
Mre11Q61216 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Mre11Q61216 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.3■□□□□ 0.36
Mre11Q61216 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mre11Q61216 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Mre11Q61216 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Mre11Q61216 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Mre11Q61216 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Mre11Q61216 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mre11Q61216 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Mre11Q61216 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mre11Q61216 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mre11Q61216 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms