Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf20Q5DTM8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Gm18057-201ENSMUST00000208220 503 ntBASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf20Q5DTM8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf20Q5DTM8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Rnf20Q5DTM8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf20Q5DTM8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf20Q5DTM8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf20Q5DTM8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms