Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.55□□□□□ -0.4
Q3U1D9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.55□□□□□ -0.4
Q3U1D9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Gm3436-201ENSMUST00000179930 840 ntBASIC12.55□□□□□ -0.4
Q3U1D9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.55□□□□□ -0.4
Q3U1D9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.55□□□□□ -0.4
Q3U1D9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.55□□□□□ -0.4
Q3U1D9 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.55□□□□□ -0.4
Q3U1D9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Gm14719-201ENSMUST00000121891 340 ntBASIC12.54□□□□□ -0.4
Q3U1D9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.54□□□□□ -0.4
Q3U1D9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.54□□□□□ -0.4
Q3U1D9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Q3U1D9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Q3U1D9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Q3U1D9 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.54□□□□□ -0.4
Q3U1D9 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.54□□□□□ -0.4
Q3U1D9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Q3U1D9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.54□□□□□ -0.4
Q3U1D9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.54□□□□□ -0.4
Q3U1D9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q3U1D9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Q3U1D9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Q3U1D9 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.53□□□□□ -0.4
Q3U1D9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.53□□□□□ -0.4
Q3U1D9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.53□□□□□ -0.4
Q3U1D9 Gm15487-201ENSMUST00000122373 465 ntBASIC12.53□□□□□ -0.4
Q3U1D9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Gm23547-201ENSMUST00000158210 271 ntBASIC12.53□□□□□ -0.4
Q3U1D9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.53□□□□□ -0.4
Q3U1D9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3U1D9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.53□□□□□ -0.4
Q3U1D9 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.53□□□□□ -0.4
Q3U1D9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Mir125a-201ENSMUST00000083545 68 ntBASIC12.53□□□□□ -0.4
Q3U1D9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q3U1D9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Q3U1D9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.53□□□□□ -0.4
Q3U1D9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms