Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lrrc28Q3TX51 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lrrc28Q3TX51 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Mir1897-201ENSMUST00000122581 272 ntBASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Gm27631-201ENSMUST00000184163 466 ntBASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Gm16476-201ENSMUST00000221544 139 ntBASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lrrc28Q3TX51 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Gm15487-201ENSMUST00000122373 465 ntBASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc28Q3TX51 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm14719-201ENSMUST00000121891 340 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm5866-201ENSMUST00000177881 973 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Dupd1-202ENSMUST00000224735 548 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.68□□□□□ -0.22
Lrrc28Q3TX51 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms