Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Xrn1P97789 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Xrn1P97789 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm37259-201ENSMUST00000193903 849 ntBASIC20.16■□□□□ 0.82
Xrn1P97789 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC20.16■□□□□ 0.82
Xrn1P97789 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Xrn1P97789 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm8706-201ENSMUST00000197372 1491 ntBASIC20.16■□□□□ 0.82
Xrn1P97789 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm27516-201ENSMUST00000184237 98 ntBASIC20.16■□□□□ 0.82
Xrn1P97789 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC20.16■□□□□ 0.82
Xrn1P97789 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Xrn1P97789 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Xrn1P97789 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrn1P97789 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrn1P97789 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrn1P97789 Gm13730-201ENSMUST00000121036 1462 ntBASIC20.15■□□□□ 0.82
Xrn1P97789 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC20.15■□□□□ 0.82
Xrn1P97789 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC20.15■□□□□ 0.82
Xrn1P97789 AC140406.1-201ENSMUST00000226481 465 ntBASIC20.15■□□□□ 0.82
Xrn1P97789 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.15■□□□□ 0.82
Xrn1P97789 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Xrn1P97789 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Xrn1P97789 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Xrn1P97789 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Xrn1P97789 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Xrn1P97789 Gm11658-201ENSMUST00000120913 1008 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 Gm2467-201ENSMUST00000182266 1010 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 Gm6981-201ENSMUST00000182467 1008 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 AC133598.1-201ENSMUST00000224327 660 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 AC154276.1-201ENSMUST00000228874 1299 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Xrn1P97789 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Xrn1P97789 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Xrn1P97789 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Xrn1P97789 Gm6203-201ENSMUST00000209575 1342 ntBASIC20.14■□□□□ 0.81
Xrn1P97789 Gm26083-201ENSMUST00000157904 193 ntBASIC20.13■□□□□ 0.81
Xrn1P97789 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Xrn1P97789 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC20.13■□□□□ 0.81
Xrn1P97789 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC20.13■□□□□ 0.81
Xrn1P97789 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.13■□□□□ 0.81
Xrn1P97789 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Xrn1P97789 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Xrn1P97789 Efs-202ENSMUST00000227037 2540 ntBASIC20.13■□□□□ 0.81
Xrn1P97789 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.13■□□□□ 0.81
Xrn1P97789 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.13■□□□□ 0.81
Xrn1P97789 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Xrn1P97789 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Xrn1P97789 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms