Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rps28P62858 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.46□□□□□ -1.06
Rps28P62858 Celf4-206ENSMUST00000224553 1729 ntBASIC8.46□□□□□ -1.06
Rps28P62858 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rps28P62858 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rps28P62858 Gm5939-201ENSMUST00000119613 2874 ntBASIC8.45□□□□□ -1.06
Rps28P62858 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC8.45□□□□□ -1.06
Rps28P62858 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rps28P62858 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rps28P62858 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rps28P62858 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.44□□□□□ -1.06
Rps28P62858 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Rps28P62858 BC043934-202ENSMUST00000185694 2356 ntBASIC8.44□□□□□ -1.06
Rps28P62858 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rps28P62858 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC8.44□□□□□ -1.06
Rps28P62858 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC8.44□□□□□ -1.06
Rps28P62858 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC8.44□□□□□ -1.06
Rps28P62858 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Rps28P62858 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rps28P62858 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.44□□□□□ -1.06
Rps28P62858 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC8.44□□□□□ -1.06
Rps28P62858 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.44□□□□□ -1.06
Rps28P62858 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rps28P62858 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms