Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm5566-201ENSMUST00000116118 459 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Mir1897-201ENSMUST00000122581 272 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.34□□□□□ -0.11
Atxn1P54254 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.34□□□□□ -0.11
Atxn1P54254 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm18624-201ENSMUST00000220966 658 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atxn1P54254 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atxn1P54254 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atxn1P54254 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atxn1P54254 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atxn1P54254 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atxn1P54254 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atxn1P54254 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.33□□□□□ -0.12
Atxn1P54254 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Gm4984-201ENSMUST00000115987 360 ntBASIC14.33□□□□□ -0.12
Atxn1P54254 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Gm9522-201ENSMUST00000182394 926 ntBASIC14.33□□□□□ -0.12
Atxn1P54254 Gm43703-201ENSMUST00000200523 763 ntBASIC14.33□□□□□ -0.12
Atxn1P54254 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.33□□□□□ -0.12
Atxn1P54254 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Atxn1P54254 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.33□□□□□ -0.12
Atxn1P54254 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.33□□□□□ -0.12
Atxn1P54254 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.33□□□□□ -0.12
Atxn1P54254 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atxn1P54254 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Atxn1P54254 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.32□□□□□ -0.12
Atxn1P54254 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.32□□□□□ -0.12
Atxn1P54254 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Gm5035-201ENSMUST00000215581 927 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Gm46209-201ENSMUST00000217912 553 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.32□□□□□ -0.12
Atxn1P54254 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atxn1P54254 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atxn1P54254 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atxn1P54254 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.31□□□□□ -0.12
Atxn1P54254 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Atxn1P54254 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atxn1P54254 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms