Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm17968-201ENSMUST00000194902 784 ntBASIC14.45□□□□□ -0.1
Fdft1P53798 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Gm18206-201ENSMUST00000207027 926 ntBASIC14.45□□□□□ -0.1
Fdft1P53798 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.45□□□□□ -0.1
Fdft1P53798 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Fdft1P53798 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
Fdft1P53798 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.45□□□□□ -0.1
Fdft1P53798 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Fdft1P53798 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.44□□□□□ -0.1
Fdft1P53798 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.44□□□□□ -0.1
Fdft1P53798 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Fdft1P53798 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.44□□□□□ -0.1
Fdft1P53798 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.44□□□□□ -0.1
Fdft1P53798 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Fdft1P53798 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Fdft1P53798 Gm16026-204ENSMUST00000162652 683 ntBASIC14.44□□□□□ -0.1
Fdft1P53798 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Gm45747-201ENSMUST00000212203 999 ntBASIC14.44□□□□□ -0.1
Fdft1P53798 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Fdft1P53798 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Fdft1P53798 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.44□□□□□ -0.1
Fdft1P53798 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.44□□□□□ -0.1
Fdft1P53798 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Fdft1P53798 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Fdft1P53798 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Gm13464-201ENSMUST00000119418 935 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 Gm9726-201ENSMUST00000180321 678 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.43□□□□□ -0.1
Fdft1P53798 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.43□□□□□ -0.1
Fdft1P53798 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Fdft1P53798 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Fdft1P53798 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fdft1P53798 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.42□□□□□ -0.1
Fdft1P53798 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Fdft1P53798 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms