Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Sox1P53783 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox1P53783 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sox1P53783 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox1P53783 Gm22331-201ENSMUST00000158066 136 ntBASIC14.68□□□□□ -0.06
Sox1P53783 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.68□□□□□ -0.06
Sox1P53783 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox1P53783 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox1P53783 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Sox1P53783 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox1P53783 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox1P53783 Gm14263-201ENSMUST00000117955 746 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.67□□□□□ -0.06
Sox1P53783 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.67□□□□□ -0.06
Sox1P53783 Gm16505-201ENSMUST00000179981 232 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox1P53783 Mir6979-201ENSMUST00000183927 56 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Gm37008-201ENSMUST00000195712 319 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Gm38671-201ENSMUST00000200573 130 ntBASIC14.67□□□□□ -0.06
Sox1P53783 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox1P53783 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox1P53783 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.66□□□□□ -0.06
Sox1P53783 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox1P53783 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
Sox1P53783 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Sox1P53783 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms