Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 SIRPAP1-201ENST00000448467 1770 ntBASIC16.92■□□□□ 0.3
PDX1P52945 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.92■□□□□ 0.3
PDX1P52945 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDX1P52945 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDX1P52945 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.92■□□□□ 0.3
PDX1P52945 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDX1P52945 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
PDX1P52945 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.91■□□□□ 0.3
PDX1P52945 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PDX1P52945 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 COX5BP2-201ENST00000392354 334 ntBASIC16.91■□□□□ 0.3
PDX1P52945 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.91■□□□□ 0.3
PDX1P52945 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.91■□□□□ 0.3
PDX1P52945 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.91■□□□□ 0.3
PDX1P52945 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 DNAJB3-202ENST00000449667 1266 ntBASIC16.91■□□□□ 0.3
PDX1P52945 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.91■□□□□ 0.3
PDX1P52945 DUTP2-201ENST00000519164 463 ntBASIC16.91■□□□□ 0.3
PDX1P52945 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.91■□□□□ 0.3
PDX1P52945 AC027796.2-201ENST00000575326 344 ntBASIC16.91■□□□□ 0.3
PDX1P52945 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.91■□□□□ 0.3
PDX1P52945 AL589182.2-201ENST00000619332 1049 ntBASIC16.91■□□□□ 0.3
PDX1P52945 AC004706.3-202ENST00000621574 984 ntBASIC16.91■□□□□ 0.3
PDX1P52945 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.91■□□□□ 0.3
PDX1P52945 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDX1P52945 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
PDX1P52945 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDX1P52945 AC132938.5-201ENST00000624980 1813 ntBASIC16.91■□□□□ 0.3
PDX1P52945 PCDHB18P-201ENST00000524813 2368 ntBASIC16.91■□□□□ 0.3
PDX1P52945 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.9■□□□□ 0.3
PDX1P52945 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 AP000997.3-201ENST00000623333 2250 ntBASIC16.9■□□□□ 0.3
PDX1P52945 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDX1P52945 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.9■□□□□ 0.3
PDX1P52945 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.9■□□□□ 0.3
PDX1P52945 AC103564.2-201ENST00000432853 1299 ntBASIC16.9■□□□□ 0.3
PDX1P52945 AP006288.1-201ENST00000446065 395 ntBASIC16.9■□□□□ 0.3
PDX1P52945 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.9■□□□□ 0.3
PDX1P52945 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.9■□□□□ 0.3
PDX1P52945 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.9■□□□□ 0.3
PDX1P52945 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.9■□□□□ 0.3
PDX1P52945 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms