Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.24□□□□□ -0.45
Ccl11P48298 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl11P48298 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl11P48298 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl11P48298 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl11P48298 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl11P48298 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl11P48298 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
Ccl11P48298 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Gm5866-201ENSMUST00000177881 973 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Gm46209-201ENSMUST00000217912 553 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Gm7775-201ENSMUST00000218871 853 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccl11P48298 Gm16476-201ENSMUST00000221544 139 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Dupd1-202ENSMUST00000224735 548 ntBASIC12.23□□□□□ -0.45
Ccl11P48298 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl11P48298 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ccl11P48298 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl11P48298 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccl11P48298 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.22□□□□□ -0.45
Ccl11P48298 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccl11P48298 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ccl11P48298 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Gm45453-201ENSMUST00000211758 853 ntBASIC12.22□□□□□ -0.45
Ccl11P48298 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccl11P48298 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccl11P48298 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl11P48298 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccl11P48298 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccl11P48298 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl11P48298 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms