Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Xcl1P47993 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC9.38□□□□□ -0.91
Xcl1P47993 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Xcl1P47993 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Il17rd-203ENSMUST00000225146 3366 ntBASIC9.37□□□□□ -0.91
Xcl1P47993 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC9.37□□□□□ -0.91
Xcl1P47993 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC9.37□□□□□ -0.91
Xcl1P47993 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC9.37□□□□□ -0.91
Xcl1P47993 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Xcl1P47993 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Xcl1P47993 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Xcl1P47993 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Xcl1P47993 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Xcl1P47993 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Xcl1P47993 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.36□□□□□ -0.91
Xcl1P47993 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Xcl1P47993 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.36□□□□□ -0.91
Xcl1P47993 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Xcl1P47993 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.36□□□□□ -0.91
Xcl1P47993 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Xcl1P47993 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Xcl1P47993 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms