Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Hmx3P42581 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmx3P42581 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.13□□□□□ -0.47
Hmx3P42581 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Hmx3P42581 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.13□□□□□ -0.47
Hmx3P42581 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmx3P42581 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.12□□□□□ -0.47
Hmx3P42581 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm12497-201ENSMUST00000138778 237 ntBASIC12.12□□□□□ -0.47
Hmx3P42581 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmx3P42581 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmx3P42581 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmx3P42581 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmx3P42581 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmx3P42581 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmx3P42581 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Hmx3P42581 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmx3P42581 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.11□□□□□ -0.47
Hmx3P42581 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hmx3P42581 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Ank2-226ENSMUST00000189368 339 ntBASIC12.11□□□□□ -0.47
Hmx3P42581 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.11□□□□□ -0.47
Hmx3P42581 Gm18669-201ENSMUST00000216049 778 ntBASIC12.11□□□□□ -0.47
Hmx3P42581 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hmx3P42581 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmx3P42581 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hmx3P42581 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Hmx3P42581 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.1□□□□□ -0.47
Hmx3P42581 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.1□□□□□ -0.47
Hmx3P42581 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hmx3P42581 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms