Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp9P41245 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp9P41245 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp9P41245 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.16□□□□□ -0.46
Mmp9P41245 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Mmp9P41245 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Mmp9P41245 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Mmp9P41245 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp9P41245 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mmp9P41245 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.15□□□□□ -0.46
Mmp9P41245 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.15□□□□□ -0.46
Mmp9P41245 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.15□□□□□ -0.46
Mmp9P41245 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.15□□□□□ -0.46
Mmp9P41245 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Mmp9P41245 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.15□□□□□ -0.46
Mmp9P41245 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Mmp9P41245 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Mmp9P41245 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp9P41245 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp9P41245 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp9P41245 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.47
Mmp9P41245 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Mmp9P41245 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.14□□□□□ -0.47
Mmp9P41245 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Mmp9P41245 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.14□□□□□ -0.47
Mmp9P41245 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.14□□□□□ -0.47
Mmp9P41245 Gm2213-201ENSMUST00000197485 688 ntBASIC12.14□□□□□ -0.47
Mmp9P41245 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.14□□□□□ -0.47
Mmp9P41245 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Mmp9P41245 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.14□□□□□ -0.47
Mmp9P41245 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Mmp9P41245 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Mmp9P41245 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Mmp9P41245 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Mmp9P41245 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Mmp9P41245 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Mmp9P41245 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mmp9P41245 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Mmp9P41245 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms